Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931076.1_cds_XP_016477981.1_69659
CDS Infomation

[gene=LOC107799388] [db_xref=GeneID:107799388] [protein=transcriptional corepressor SEUSS-like] [protein_id=XP_016477981.1] [location=join(54620..55156,55253..55372,55703..55751,56423..56637,56746..56814,57076..57170,57621..57714,58513..58582,58686..59506)] [gbkey=CDS]
Sequence

ATGAGCTCTGATAACATCAAACTTGCTCCTTCCACCCCGTTGTTAGACGAGCAGAAACTG
GTAGTTCGGCAGCAGCATGAGCCAAAGTCACGGCGCAGATCGCAGAAATTCCAACAGATT
CAGGACAGCTCAGTGAGTGCAAAACCATTTCATGAGGAGAATCCAAAATTATTGGAGGAC
TTGGATAAGGCGACGAGCAAGTCTCGTCCGAGTGTGCTTCAGTCACCAGTGCAACAAAAA
ACTAAGGTCATAATAAAACGTGAATGTTCAGTTCCACCGATGATTCCAGAACATTCTTTG
AGGAAGGACAAACAGCCTCTCATCCAAGACTCGTTTCCGCCTACTTTTCCTCAAATGAAC
TTAGCATCTCAGCCTCCAAATGCATTGATGTGGCTTTTACAGCAGCAAATGCAACTAGTG
AGGACAGCTCATGAGAAATGTTCAGAAATTGCGGCTGATGGAAGATCAGTATATAAGCCA
GGAATATGTGTTCAACGTTTGAAACAATACATGTACCTTCAGAAGCAAAGACCAAGAGAC
AATGATATCGAGTTTTGGAGGAATTTAGTTGCAGAATTCTTTGCTCCCAATGCCAAGATA
AAAACATGCTTTTCATTGAATAAAAATAGGCAACGAATAAGTTGTCTTTTCCCTCAGGAG
GCATGGTACTGTGAGATCTGCAAAGTGAGGCCTACTGCTGGTTTTGAGCTCAGCGCAGAA
GTTCTACCTAGGGTATGCAAAATTAAGTATGATACCGGTATGCTGGAGGAGCTTCTTTAT
GTGGATATACCTGAAGAGTATTGCACACCATCTGGTCACATTGTTTTGAACTACACAAAA
GTAACAGAAGAAAGTGTATATGAGGCAGCACGAGTGGTCCGTGAAGGCCGGCTCAAGATT
GTGTTTTCTTCAGATCTAAAGATTTGTATCTGGGAATTCTGCTGTTCTTCTCACGAGGTG
CTTATCGATCGAAGATCAGTTACTCCCCAGGTTCATCAACTCAGGGAAGCAATCCAGAAA
TACCAAGCTTTTGTTAAGAGTTGCTCAGGGATTGCTTCAGAAGAATTTAAAAGAAACTCC
AACAAGTTTACTTCATCAATAAGACAATTAGCAAGAGTTTTGGACAAGTCTTTGATCAAT
GATCTTGGTTATACCAAGCGCTATGTCCGATGCCTCCAGACAGCAGAAATAGTCAACGGC
ATGAAAGATCTAATGGACTACAGCAAGAAATACGGGATGGGACCTGCAGAAGCCATGGAC
AGGTTGTATCGTCAATCTCTTGCATCATGTGTGACACATAATAATTCAGGTGTAAAAGAA
GAACCTCAACAACATCCAGAGCAAGAGCAATCATACTTATATGACGACGCAAAAGATGAG
GACTCTTCTGTAATAAGTTATACTCCTTTGTCATCTAATGAAGAAACAGAAAGTTCAAGT
TTATCCCATCATGCTACATCGCCAACTGCCTCTACTGCTACATCCAAAAGACTGGTTCAC
TTAGTAGACATTGTCGAATCTAAAAGAAAGAAACAAATGACAAACTCAGGGGAGACTTCT
CTTCTGCTTGCTTCGACCGAGCCTGTGATGAATCAGCCAATCTCCACAACTCCTCCTTTT
TCTTCCATTAGGTCATTTCTAGCTCAACCATCTTCTGCTGAGAGAGTCGTCAAATCTAAT
GCTACGTCAGGTGAACCTATTGAATATCTGAGCTCCAAGGTAAAGGTTAAAGAAGATCTT
GTCGCTTCTCAAAATATAGCTGCTGCTGCTGCTGAAGATGCGATTGTTGGTAACGTTCTG
AAACAGAAGGAGAAGAAGGATGATGATAAAGGTAAGTACTGCTATGGATTTGAAACTGAT
GGAATGGTTGAGAAAAGCTATTACATGGATCAGTTGGAATCAGAAAACTTGAATGGGGTA
AGTCCTTTCTCTGGAATTCACATTGGATCTCCTTTGAACGGCACGTTAGTGGTGAATGAT
ACTGATCATAGCAACAACCAGCAATTCAATGACAAACTGCTTTATTGGAACGGAGAAATG
GACCCTATCGATGATATTCAGTTCGACTGA

Peptide Sequence

PEP ID

XP_016477981.1
PEP Infomation

PREDICTED: transcriptional corepressor SEUSS-like [Nicotiana tabacum]
Sequence

MSSDNIKLAPSTPLLDEQKLVVRQQHEPKSRRRSQKFQQIQDSSVSAKPFHEENPKLLED
LDKATSKSRPSVLQSPVQQKTKVIIKRECSVPPMIPEHSLRKDKQPLIQDSFPPTFPQMN
LASQPPNALMWLLQQQMQLVRTAHEKCSEIAADGRSVYKPGICVQRLKQYMYLQKQRPRD
NDIEFWRNLVAEFFAPNAKIKTCFSLNKNRQRISCLFPQEAWYCEICKVRPTAGFELSAE
VLPRVCKIKYDTGMLEELLYVDIPEEYCTPSGHIVLNYTKVTEESVYEAARVVREGRLKI
VFSSDLKICIWEFCCSSHEVLIDRRSVTPQVHQLREAIQKYQAFVKSCSGIASEEFKRNS
NKFTSSIRQLARVLDKSLINDLGYTKRYVRCLQTAEIVNGMKDLMDYSKKYGMGPAEAMD
RLYRQSLASCVTHNNSGVKEEPQQHPEQEQSYLYDDAKDEDSSVISYTPLSSNEETESSS
LSHHATSPTASTATSKRLVHLVDIVESKRKKQMTNSGETSLLLASTEPVMNQPISTTPPF
SSIRSFLAQPSSAERVVKSNATSGEPIEYLSSKVKVKEDLVASQNIAAAAAEDAIVGNVL
KQKEKKDDDKGKYCYGFETDGMVEKSYYMDQLESENLNGVSPFSGIHIGSPLNGTLVVND
TDHSNNQQFNDKLLYWNGEMDPIDDIQFD

Transcript Sequence

Gene sequence data has not been registered.